Sensitive Data (SD) services user guide - Table of contents

Store and analyse research data

• Start here: Creating a CSC project
  • Access as a project manager
  • Access as a project member

Store and share with SD Connect

• Store and share with SD Connect
  • Login to SD Connect
  • Upload
  • Share
    • Transfer data to another project
    • Use folder as your shared workspace
    • Give access to folder content only in SD Desktop
  • Download
  • Delete
  • Command line interface
  • Troubleshooting

Analyze and compute with SD Desktop

• Analyze and compute with Sensitive Data Desktop
  • Login to SD Desktop
  • Create virtual desktop
  • Manage virtual desktop
  • Access virtual desktop
  • Working with your virtual desktop
  • Customisation - software & tools
  • Import data
  • Export data via user interface
  • Export data programmatically
  • Troubleshooting

Publish and reuse research data

Publish with Fedarated EGA

• Publish with Fedarated EGA
  • Publish data

Reuse with SD Apply

• Reuse with SD Apply
  • Apply access to FEGA data
  • Approve access to FEGA data
  • Enable reuse of FEGA data

Secondary use of health and social data

Start here: Accessing secondary use health or social data via Sensitive Data services

• Start here: Accessing secondary use health or social data via Sensitive Data services
  • Access with Findata permit
  • Access with register permit

Analyze with SD Desktop for secondary use

• Analyze with SD Desktop for secondary use
  • Login to SD Desktop
  • Create virtual desktop
  • Manage virtual desktop
  • Access virtual desktop
  • Work with your desktop and software
  • Customisation - software & tools
  • Import data
  • Export data
  • Troubleshooting

Tutorials

• Adding missing Python libraries to Pythion in SD Desktop
• Adding RStudio and R libraries to SD Desktop
• Auto-apptainer
• Backup for SD Desktop
• Decrypting all files in a directory
• Extending SD Desktop software environment with your own Apptainer containers
• Install VS Code in SD Desktop
• Install Whisper in SD Desktop
• Podman in SD Desktop
• Running temporary PostgreSQL database in SD Desktop
• Using Allas storage service to receive sensitive research data

Misc

• Useful terminology: services and technical aspects

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